gmmd.classifier.obtain_MSM_list

gmmd.classifier.obtain_MSM_list(data, sample_num, idx_list=None)

Return GEM barcodes that are MSMs.

Parameters

• data (pandas.DataFrame) – Simplified classification result, generated by gmmd.classifier.store_simplified_classify_result().

• sample_num (int) – Number of HTO samples.

• idx_list (list, Default = None) – List of index to extract.

Return type

list