gmmd.classifier.store_simplified_classify_result

gmmd.classifier.store_simplified_classify_result(data, class_name_array, path, sample_num, confidence_threshold)

Store the simplified classification result in {path}/GMM_simplified.csv. The result will combine MSM classifications and mark those with confidence under the threshold as unclear. The corresponding cluster names can be found in {path}/GMM_simplified.config.

Parameters
  • data (pandas.DataFrame) – Classification result, generated by gmmd.classifier.classify_drops().

  • class_name_array (list) – All class names, generated by gmmd.classifier.classify_drops().

  • path (String) – File path to store the result.

  • sample_num (int) – Number of the HTO samples.

  • confidence_threshold (float) – Confidence threshold.

Returns

Simplified classification result.

Return type

pandas.DataFrame