gmmd.classifier.classify_drops
- gmmd.classifier.classify_drops(base_bv_array, high_array, low_array, data)
Calculate confidence of all GEM cells.
- Parameters
base_bv_array (
list) – Binary array with all combinations of cells, generated bygmmd.compute.obtain_base_bv_array().high_array (
list) – Post probabilities of the higher mean Gaussian distribution, generated bygmmd.classifier.obtain_arrays().low_array (
list) – Post probabilities of the lower mean Gaussian distribution, generated bygmmd.classifier.obtain_arrays().data (
pandas.DataFrame) – CLR-transformed HTO matrix.
- Returns
Classified results and confidence, all class names.
- Return type
pandas.DataFrame,list