gmmd.compute.obtain_HTO_GEM_num

gmmd.compute.obtain_HTO_GEM_num(data, base_bv_array)

Find HTO numbers from the given data.

Parameters

• data (pandas.DataFrame) – Purified classification result, generated by gmmd.classifier.purify_droplets().

• base_bv_array (list) – Binary array with all combinations of cells, generated by gmmd.compute.obtain_base_bv_array().

Returns

A list of HTO numbers for each cell type.

Return type

list